PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_130776g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 356aa    MW: 39396.8 Da    PI: 6.4487
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_130776g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.7e-13161212155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r +h e+Er+RR+++N  ++ Lr+l+P++   + ++ + a+i   A++ +k+L+
  MA_130776g0010 161 QRITHIEVERNRRKQMNAHLDVLRSLIPQS---YIQRGDQASIIGGAIDLVKELE 212
                     799***************************...9*****************9995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-15153221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.9160211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.73E-12160216No hitNo description
PfamPF000107.4E-10161212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-12161215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-9166217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MEIIEEMIEI PRLNDNLGLN IPWLHGGLFR KRLTSSPLHS EPAGKQGNTG PNLENYFTRL  60
VQGFEPVESC VTAISELKPG GNIDTFNALH SHSDTAEDGI SDTTQEDQQN AISMAVPAAD  120
AGKGEDQQNA ISMAVPAADA GKGRKRRRLK VSKNSEEVLS QRITHIEVER NRRKQMNAHL  180
DVLRSLIPQS YIQRGDQASI IGGAIDLVKE LEQILQSLQF QKIKRENADR TDPKNCLSII  240
PPHQLFAPCN SKCVVDTSSS QLREAEDKSS IADIEVTLIE THGSLKILSK KKHGQLLKII  300
TALEGFHMTI LHLNITSMDE AVLFSFNVKV EDECPLTSAN DIARSLHQIL RIVHAC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143147RKRRR
2144148KRRRL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1176750.0BT117675.1 Picea glauca clone GQ03907_D16 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010272971.16e-69PREDICTED: transcription factor bHLH96-like
SwissprotQ56YJ83e-59FAMA_ARATH; Transcription factor FAMA
TrEMBLB8LLL61e-78B8LLL6_PICSI; Putative uncharacterized protein
STRINGGLYMA19G42520.12e-62(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP25315131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.13e-58bHLH family protein